Pseudomonas aeruginosa PAO1, PA0012

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse View in GBrowse PseudoCyc / Metabolic Pathways

Gene Feature Overview

Strain Pseudomonas aeruginosa PAO1 (Reference)
Locus Tag
PA0012
Name
Replicon chromosome
Genomic location 15207 - 15473 (+ strand)
Transposon Mutants 2 transposon mutants in PAO1

Cross-References

RefSeq NP_248702.1
GI 15595210
Affymetrix PA0012_at
DNASU PaCD00006008
Entrez 877795
GenBank AAG03402.1
INSDC AAG03402.1
NCBI Locus Tag PA0012
protein_id(GenBank) gb|AAG03402.1|AE004441_3|gnl|PseudoCAP|PA0012
TIGR NTL03PA00013
UniParc UPI00000C4EE7
UniProtKB Acc Q9I7B4
UniProtKB ID Q9I7B4_PSEAE
UniRef100 UniRef100_Q9I7B4
UniRef50 UniRef50_F2MV00
UniRef90 UniRef90_Q9I7B4

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Product Name Confidence: Class 4
Evidence for Translation
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
Charge (pH 7) -1.57
Kyte-Doolittle Hydrophobicity Value -0.239
Molecular Weight (kDa) 9.8
Isoelectric Point (pI) 5.64

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 9 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000012 (392 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA0012

Transposon Insertions in PAO1

Type ISlacZ/hah insertion site
Mutant ID UWGC: 5296
Genomic Position 15378
Position in ORF 172(267)
Reference 14617778
Type Confirmed ISphoA/hah insertion site
Mutant ID UWGC: 55458
Genomic Position 15322
Position in ORF 116(267)
Reference 14617778

Transposon Insertions in Orthologs

References

No references are associated with this feature.