Pseudomonas aeruginosa PAO1, PA0021

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse View in GBrowse PseudoCyc / Metabolic Pathways

Gene Feature Overview

Strain Pseudomonas aeruginosa PAO1 (Reference)
Locus Tag
PA0021
Name
Synonym: smf
Replicon chromosome
Genomic location 22872 - 23960 (+ strand)
Transposon Mutants 3 transposon mutants in PAO1

Cross-References

RefSeq NP_248711.1
GI 15595219
Affymetrix PA0021_at
Entrez 880730
GenBank AAG03411.1
INSDC AAG03411.1
NCBI Locus Tag PA0021
protein_id(GenBank) gb|AAG03411.1|AE004441_12|gnl|PseudoCAP|PA0021
TIGR NTL03PA00022
UniParc UPI00000C4EEE
UniProtKB Acc Q9I7A6
UniProtKB ID Q9I7A6_PSEAE
UniRef100 UniRef100_Q9I7A6
UniRef50 UniRef50_A0A024H9I0
UniRef90 UniRef90_Q9I7A6

Product

Feature Type CDS
Coding Frame 1
Product Name
conserved hypothetical protein
Product Name Confidence: Class 4
Evidence for Translation
Charge (pH 7) 0.59
Kyte-Doolittle Hydrophobicity Value 0.079
Molecular Weight (kDa) 37.7
Isoelectric Point (pI) 7.13

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown (This protein may have multiple localization sites) Class 3
Unknown (This protein may have multiple localization sites) Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 572 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000021 (560 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA0021

Transposon Insertions in PAO1

Type mini-Tn5 lux transposon insertion site (Non-transcriptional fusion)
Mutant ID UBC: PAO1_lux_1_F4
Genomic Position 23396
Position in ORF 525(1089)
Reference 15805499
Type ISlacZ/hah insertion site
Mutant ID UWGC: 7903
Genomic Position 23416
Position in ORF 545(1089)
Reference 14617778
Type ISphoA/hah insertion site
Mutant ID UWGC: 43134
Genomic Position 23868
Position in ORF 997(1089)
Reference 14617778

Transposon Insertions in Orthologs

References

No references are associated with this feature.