Pseudomonas aeruginosa PAO1, PA0039

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse View in GBrowse PseudoCyc / Metabolic Pathways

Gene Feature Overview

Strain Pseudomonas aeruginosa PAO1 (Reference)
Locus Tag
PA0039
Name
Replicon chromosome
Genomic location 40589 - 40816 (+ strand)
Transposon Mutants 1 transposon mutants in PAO1

Cross-References

RefSeq NP_248729.1
GI 15595237
Affymetrix PA0039_at
DNASU PaCD00006019
Entrez 879200
GenBank AAG03429.1
INSDC AAG03429.1
NCBI Locus Tag PA0039
protein_id(GenBank) gb|AAG03429.1|AE004443_7|gnl|PseudoCAP|PA0039
TIGR NTL03PA00040
UniParc UPI00000C4EF9
UniProtKB Acc Q9I793
UniProtKB ID Q9I793_PSEAE
UniRef100 UniRef100_Q9I793
UniRef50 UniRef50_W0YJZ2
UniRef90 UniRef90_W0YJZ2

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Product Name Confidence: Class 4
Evidence for Translation
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
Detected by iTRAQ (PMID:21863142).
Charge (pH 7) 1.92
Kyte-Doolittle Hydrophobicity Value 0.195
Molecular Weight (kDa) 7.9
Isoelectric Point (pI) 8.73

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 23 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000039 (520 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA0039

Transposon Insertions in PAO1

Type mini-Tn5 lux transposon insertion site (Transcriptional fusion)
Mutant ID UBC: PAO1_lux_131_A2
Genomic Position 40803
Position in ORF 215(228)
Reference 15805499

Transposon Insertions in Orthologs

References

Comparisons of Two Proteomic Analyses of Non-Mucoid and Mucoid Pseudomonas aeruginosa Clinical Isolates from a Cystic Fibrosis Patient.
Rao J, Damron FH, Basler M, Digiandomenico A, Sherman NE, Fox JW, Mekalanos JJ, Goldberg JB
Front Microbiol 2011 ;2
PubMed ID: 21863142