Pseudomonas aeruginosa PAO1, PA0055

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse View in GBrowse PseudoCyc / Metabolic Pathways

Gene Feature Overview

Strain Pseudomonas aeruginosa PAO1 (Reference)
Locus Tag
PA0055
Name
Replicon chromosome
Genomic location 70130 - 70636 (- strand)
Transposon Mutants 2 transposon mutants in PAO1

Cross-References

RefSeq NP_248745.1
GI 15595253
Affymetrix PA0055_at
Entrez 877862
GenBank AAG03445.1
INSDC AAG03445.1
NCBI Locus Tag PA0055
protein_id(GenBank) gb|AAG03445.1|AE004445_6|gnl|PseudoCAP|PA0055
TIGR NTL03PA00056
UniParc UPI00000C4F08
UniProtKB Acc Q9I777
UniProtKB ID Q9I777_PSEAE
UniRef100 UniRef100_W0YLX1
UniRef50 UniRef50_Q13PJ9
UniRef90 UniRef90_A6UXB6

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Product Name Confidence: Class 4
Evidence for Translation
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
Charge (pH 7) -2.28
Kyte-Doolittle Hydrophobicity Value -0.003
Molecular Weight (kDa) 18.4
Isoelectric Point (pI) 5.72

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 87 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000054 (487 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA0055

Transposon Insertions in PAO1

Type Confirmed ISlacZ/hah insertion site
Mutant ID UWGC: 1385
Genomic Position 70252
Position in ORF 123(507)
Reference 14617778
Type ISlacZ/hah insertion site
Mutant ID UWGC: 1796
Genomic Position 70594
Position in ORF 465(507)
Reference 14617778

Transposon Insertions in Orthologs

References

No references are associated with this feature.