Pseudomonas aeruginosa PAO1, PA0642

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse View in GBrowse PseudoCyc / Metabolic Pathways

Gene Feature Overview

Strain Pseudomonas aeruginosa PAO1 (Reference)
Locus Tag
PA0642
Name
Replicon chromosome
Genomic location 698932 - 699720 (+ strand)
Transposon Mutants 1 transposon mutants in PAO1

Cross-References

RefSeq NP_249333
GI 15595839
Affymetrix PA0642_at
DNASU PaCD00006288
GenBank AAG04031.1
protein_id(GenBank) gb|AAG04031.1|AE004499_10|gnl|PseudoCAP|PA0642
TIGR NTL03PA00643
UniProtKB Acc Q9I5S4
UniProtKB ID Q9I5S4_PSEAE

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Product Name Confidence: Class 4
Evidence for Translation
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
Charge (pH 7) -0.33
Kyte-Doolittle Hydrophobicity Value 0.190
Molecular Weight (kDa) 28.4
Isoelectric Point (pI) 6.79

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Pathogenic
Found only in pathogenic strains
Hits to this gene were found in one genus

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000625 (31 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA0642

Transposon Insertions in PAO1

Type ISlacZ/hah insertion site
Mutant ID UWGC: 7081
Genomic Position 699013
Position in ORF 82(789)
Reference 14617778

Transposon Insertions in Orthologs

References

No references are associated with this feature.