Pseudomonas aeruginosa UCBPP-PA14, PA14_00280 (hemF)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas aeruginosa UCBPP-PA14
Locus Tag
PA14_00280
Name
hemF
Replicon chromosome
Genomic location 25757 - 26674 (+ strand)
Transposon Mutants in orthologs 1 transposon mutants in orthologs

Cross-References

RefSeq YP_788179.1
GI 116053744
EC Number 1.3.3.3
Entrez 4384742
INSDC ABJ14980.1
NCBI Locus Tag PA14_00280
UniParc UPI000012C4B5
UniProtKB Acc Q02V57
UniProtKB ID HEM6_PSEAB
UniRef100 UniRef100_Q02V57
UniRef50 UniRef50_P84155
UniRef90 UniRef90_A6UX86

Product

Feature Type CDS
Coding Frame 1
Product Name
coproporphyrinogen III oxidase
Evidence for Translation
Charge (pH 7) -7.53
Kyte-Doolittle Hydrophobicity Value -0.507
Molecular Weight (kDa) 34.8
Isoelectric Point (pI) 5.78

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 279 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000024 (573 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA14_00280
Search term: hemF

Human Homologs

Ensembl 86, assembly GRCh38.p7
coproporphyrinogen oxidase [Source:HGNC Symbol;Acc:HGNC:2321]
E-value: 1.9e-73
Percent Identity: 44.4

Transposon Insertions in UCBPP-PA14

Transposon Insertions in Orthologs

Type mini-Tn5 lux transposon insertion site (Transcriptional fusion)
Strain Pseudomonas aeruginosa PAO1 (Reference)
Locus Tag PA0024
Mutant ID UBC: PAO1_lux_1_H6
Genomic Position 26647
Position in ORF 912(918)
Reference 15805499

References

No references are associated with this feature.