Pseudomonas aeruginosa UCBPP-PA14, PA14_18700 (rnt)

Gene Feature Overview

Strain	Pseudomonas aeruginosa UCBPP-PA14 (Lee et al., 2006) GCF_000014625.1|latest
Locus Tag	PA14_18700
Name	rnt
Replicon	chromosome
Genomic location	1609324 - 1609998 (- strand)

Cross-References

RefSeq	YP_789637.1
GI	116051527
Entrez	4381493
INSDC	ABJ12763.1
NCBI Locus Tag	PA14_18700
UniParc	UPI00001344FB
UniProtKB Acc	Q02QZ9
UniProtKB ID	RNT_PSEAB
UniRef100	UniRef100_Q02QZ9
UniRef50	UniRef50_P30014
UniRef90	UniRef90_A6V1R8

Product

Feature Type	CDS
Coding Frame	1
Product Name	ribonuclease T
Synonyms
Evidence for Translation
Charge (pH 7)	-9.64
Kyte-Doolittle Hydrophobicity Value	-0.262
Molecular Weight (kDa)	24.7
Isoelectric Point (pI)	4.77

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

PDB 3D Structures

Accession	Header	Accession Date	Compound	Source	Resolution	Method	Percent Identity
2F96	Structural genomics, Hydrolase	12/05/05	2.1 A crystal structure of Pseudomonas aeruginosa rnase T (Ribonuclease T)	Pseudomonas aeruginosa	2.09	X-RAY DIFFRACTION	100.0

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 153 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG002137 (536 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PA14_18700 Search term: rnt Search term: ribonuclease T

Human Homologs

References