Pseudomonas aeruginosa UCBPP-PA14, PA14_20590 (amiR)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas aeruginosa UCBPP-PA14 (Lee et al., 2006)
GCF_000014625.1|latest
Locus Tag
PA14_20590
Name
amiR
Replicon chromosome
Genomic location 1772027 - 1772617 (+ strand)
Transposon Mutants in orthologs 2 transposon mutants in orthologs

Cross-References

RefSeq YP_789789.1
GI 116051378
Entrez 4382276
INSDC ABJ12614.1
NCBI Locus Tag PA14_20590
UniParc UPI0000396071
UniProtKB Acc Q02QJ7
UniProtKB ID Q02QJ7_PSEAB
UniRef100 UniRef100_Q02QJ7
UniRef50 UniRef50_P10932
UniRef90 UniRef90_P10932

Product

Feature Type CDS
Coding Frame 1
Product Name
aliphatic amidase regulator
Synonyms
Evidence for Translation
Charge (pH 7) -1.65
Kyte-Doolittle Hydrophobicity Value -0.116
Molecular Weight (kDa) 21.9
Isoelectric Point (pI) 6.51

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
1QO0 BINDING PROTEIN 10/26/99 Amide receptor of the amidase operon of Pseudomonas aeruginosa (AmiC) complexed with the negative regulator AmiR. PSEUDOMONAS AERUGINOSA 2.25 X-RAY DIFFRACTION 98.0

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 54 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002265 (328 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA14_20590
Search term: amiR

Human Homologs

References

No references are associated with this feature.