Pseudomonas aeruginosa UCBPP-PA14, PA14_20870

Gene Feature Overview

Strain	Pseudomonas aeruginosa UCBPP-PA14 (Lee et al., 2006) GCF_000014625.1|latest
Locus Tag	PA14_20870
Name
Replicon	chromosome
Genomic location	1797521 - 1799707 (- strand)
Transposon Mutants	1 transposon mutants in UCBPP-PA14
Transposon Mutants in orthologs	3 transposon mutants in orthologs

Cross-References

RefSeq	YP_789813.1
GI	116051354
Entrez	4384598
INSDC	ABJ12590.1
NCBI Locus Tag	PA14_20870
UniParc	UPI000039605C
UniProtKB Acc	Q02QH3
UniProtKB ID	Q02QH3_PSEAB
UniRef100	UniRef100_A0A077JSV6
UniRef50	UniRef50_Q4KGC6
UniRef90	UniRef90_Q9HYQ6

Product

Feature Type	CDS
Coding Frame	1
Product Name	hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7)	-10.28
Kyte-Doolittle Hydrophobicity Value	-0.248
Molecular Weight (kDa)	80.9
Isoelectric Point (pI)	5.21

Subcellular localization

Individual Mappings	Localization Confidence PMID Outer Membrane Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

PDB 3D Structures

Accession	Header	Accession Date	Compound	Source	Resolution	Method	Percent Identity
5FQU	TRANSPORT PROTEIN	12/14/15	Orthorhombic crystal structure of of PlpD (selenomethionine derivative)	PSEUDOMONAS AERUGINOSA PAO1	2.74	X-RAY DIFFRACTION	100.0
5FYA	HYDROLASE	03/04/16	Cubic crystal of the native PlpD	PSEUDOMONAS AERUGINOSA	2.141	X-RAY DIFFRACTION	100.0

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 387 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG002289 (484 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PA14_20870

Human Homologs

Ensembl 110, assembly GRCh38.p14	ENSP00000407509 patatin like phospholipase domain containing 6 [Source:HGNC Symbol;Acc:HGNC:16268] E-value: 3.4e-25 Percent Identity: 29.6
Ensembl 110, assembly GRCh38.p14	ENSP00000221249 patatin like phospholipase domain containing 6 [Source:HGNC Symbol;Acc:HGNC:16268] E-value: 3.4e-25 Percent Identity: 29.6
Ensembl 110, assembly GRCh38.p14	ENSP00000443323 patatin like phospholipase domain containing 6 [Source:HGNC Symbol;Acc:HGNC:16268] E-value: 3.4e-25 Percent Identity: 29.6
Ensembl 110, assembly GRCh38.p14	ENSP00000473211 patatin like phospholipase domain containing 6 [Source:HGNC Symbol;Acc:HGNC:16268] E-value: 3.4e-25 Percent Identity: 29.6
Ensembl 110, assembly GRCh38.p14	ENSP00000394348 patatin like phospholipase domain containing 6 [Source:HGNC Symbol;Acc:HGNC:16268] E-value: 3.4e-25 Percent Identity: 29.6

References