Pseudomonas aeruginosa PAO1, PA2552

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Feature Overview

Strain Pseudomonas aeruginosa PAO1 (Stover et al., 2000)
GCF_000006765.1|latest
Locus Tag
PA2552
Name
Synonym: acdB
Replicon chromosome
Genomic location 2884206 - 2885333 (- strand)
Transposon Mutants 1 transposon mutants in PAO1

Cross-References

RefSeq NP_251242.1
GI 15597748
Affymetrix PA2552_at
Entrez 878531
GenBank AAG05940.1
INSDC AAG05940.1
NCBI Locus Tag PA2552
protein_id(GenBank) gb|AAG05940.1|AE004683_4|gnl|PseudoCAP|PA2552
TIGR NTL03PA02552
UniParc UPI00000C5735
UniProtKB Acc Q9I0T2
UniProtKB ID Q9I0T2_PSEAE
UniRef100 UniRef100_A0A069QB27
UniRef50 UniRef50_Q4KC62
UniRef90 UniRef90_A0A024HIM6

Product

Feature Type CDS
Coding Frame 1
Product Name
probable acyl-CoA dehydrogenase
Product Name Confidence: Class 3
Synonyms
Evidence for Translation
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
Charge (pH 7) -8.55
Kyte-Doolittle Hydrophobicity Value -0.097
Molecular Weight (kDa) 40.9
Isoelectric Point (pI) 5.62

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 476 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG003019 (535 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA2552

Human Homologs

Ensembl 110, assembly GRCh38.p14
acyl-CoA dehydrogenase short chain [Source:HGNC Symbol;Acc:HGNC:90]
E-value: 2.0e-90
Percent Identity: 49.6

References

No references are associated with this feature.