Strain |
Pseudomonas aeruginosa PAO1 (Stover et al., 2000)
GCF_000006765.1|latest |
Locus Tag |
PA2840
|
Name |
Synonym: deaD |
Replicon | chromosome |
Genomic location | 3193886 - 3195589 (- strand) |
Transposon Mutants | 3 transposon mutants in PAO1 |
Transposon Mutants in orthologs | 2 transposon mutants in orthologs |
RefSeq | NP_251530.1 |
GI | 15598036 |
Affymetrix | PA2840_at |
Entrez | 882823 |
GenBank | AAG06228.1 |
INSDC | AAG06228.1 |
NCBI Locus Tag | PA2840 |
protein_id(GenBank) | gb|AAG06228.1|AE004710_10|gnl|PseudoCAP|PA2840 |
TIGR | NTL03PA02840 |
UniParc | UPI00000C5838 |
UniProtKB Acc | Q9I003 |
UniProtKB ID | Q9I003_PSEAE |
UniRef100 | UniRef100_Q9I003 |
UniRef50 | UniRef50_Q4K8U0 |
UniRef90 | UniRef90_Q9I003 |
Feature Type | CDS |
Coding Frame | 1 |
Product Name |
probable ATP-dependent RNA helicase
|
Synonyms | |
Evidence for Translation |
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
Detected using LC-MS/MS (62.11 kDa, PMID:21751344)
|
Charge (pH 7) | 8.99 |
Kyte-Doolittle Hydrophobicity Value | -0.209 |
Molecular Weight (kDa) | 62.1 |
Isoelectric Point (pI) | 9.02 |
Individual Mappings | |
Additional evidence for subcellular localization |
Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 637 genera
|
Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
Pseudomonas Ortholog Group |
POG002728 (535 members) |
Putative Inparalogs | None Found |
STRING database | Search for predicted protein-protein interactions using:
Search term: PA2840
Search term: probable ATP-dependent RNA helicase
|
Ensembl
110, assembly
GRCh38.p14
|
DEAD-box helicase 23 [Source:HGNC Symbol;Acc:HGNC:17347]
E-value:
8.5e-56
Percent Identity:
38.8
|
Ensembl
110, assembly
GRCh38.p14
|
DEAD-box helicase 23 [Source:HGNC Symbol;Acc:HGNC:17347]
E-value:
8.5e-56
Percent Identity:
38.8
|
deaD, a new Escherichia coli gene encoding a presumed ATP-dependent RNA helicase, can suppress a mutation in rpsB, the gene encoding ribosomal protein S2.
Toone WM, Rudd KE, Friesen JD
J Bacteriol 1991 Jun;173(11):3291-302
PubMed ID: 2045359
|
Proteomic analysis of outer membrane vesicles derived from Pseudomonas aeruginosa.
Choi DS, Kim DK, Choi SJ, Lee J, Choi JP, Rho S, Park SH, Kim YK, Hwang D, Gho YS
Proteomics 2011 Aug;11(16):3424-9
PubMed ID: 21751344
|