Strain |
Pseudomonas aeruginosa PAO1 (Stover et al., 2000)
GCF_000006765.1|latest |
Locus Tag |
PA2854
|
Name |
Synonym: erfK |
Replicon | chromosome |
Genomic location | 3207290 - 3208261 (- strand) |
Transposon Mutants | 2 transposon mutants in PAO1 |
Transposon Mutants in orthologs | 1 transposon mutants in orthologs |
Comment | Structural similarity to 4LZH: L,D-transpeptidase from Klebsiella pneumoniae (root-mean-square deviation: 0.7 angstroms) |
RefSeq | NP_251544.1 |
GI | 15598050 |
Affymetrix | PA2854_at |
DNASU | PaCD00007243 |
Entrez | 879852 |
GenBank | AAG06242.1 |
INSDC | AAG06242.1 |
NCBI Locus Tag | PA2854 |
protein_id(GenBank) | gb|AAG06242.1|AE004712_2|gnl|PseudoCAP|PA2854 |
TIGR | NTL03PA02854 |
UniParc | UPI00000C5845 |
UniProtKB Acc | Q9HZZ0 |
UniProtKB ID | Q9HZZ0_PSEAE |
UniRef100 | UniRef100_W0YRJ1 |
UniRef50 | UniRef50_A0A0B7DBL0 |
UniRef90 | UniRef90_A6V3N6 |
Feature Type | CDS |
Coding Frame | 1 |
Product Name |
putative L,D-transpeptidase
|
Synonyms | |
Evidence for Translation |
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
Detected by MALDI-TOF/TOF (PMID:19333994).
|
Charge (pH 7) | -6.11 |
Kyte-Doolittle Hydrophobicity Value | -0.140 |
Molecular Weight (kDa) | 34.8 |
Isoelectric Point (pI) | 5.59 |
Individual Mappings | |
Additional evidence for subcellular localization |
Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 204 genera
|
Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
Pseudomonas Ortholog Group |
POG002715 (536 members) |
Putative Inparalogs | None Found |
STRING database | Search for predicted protein-protein interactions using:
Search term: PA2854
Search term: putative L,D-transpeptidase
|
Genome-wide identification of Pseudomonas aeruginosa exported proteins using a consensus computational strategy combined with a laboratory-based PhoA fusion screen.
Lewenza S, Gardy JL, Brinkman FS, Hancock RE
Genome Res 2005 Feb;15(2):321-9
PubMed ID: 15687295
|
Analysis of the periplasmic proteome of Pseudomonas aeruginosa, a metabolically versatile opportunistic pathogen.
Imperi F, Ciccosanti F, Perdomo AB, Tiburzi F, Mancone C, Alonzi T, Ascenzi P, Piacentini M, Visca P, Fimia GM
Proteomics 2009 Apr;9(7):1901-15
PubMed ID: 19333994
|
Uncovering the structure and function of Pseudomonas aeruginosa periplasmic proteins by an in silico approach.
Caprari S, Brandi V, Pasquadibisceglie A, Polticelli F
J Biomol Struct Dyn 2020 Sep;38(15):4508-4520
PubMed ID: 31631799
|