Pseudomonas aeruginosa PAO1, PA2938

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Feature Overview

Strain Pseudomonas aeruginosa PAO1 (Stover et al., 2000)
GCF_000006765.1|latest
Locus Tag
PA2938
Name
Replicon chromosome
Genomic location 3292324 - 3293781 (- strand)
Transposon Mutants 3 transposon mutants in PAO1
Transposon Mutants in orthologs 2 transposon mutants in orthologs

Cross-References

RefSeq NP_251628.1
GI 15598134
Affymetrix PA2938_at
Entrez 882791
GenBank AAG06326.1
INSDC AAG06326.1
NCBI Locus Tag PA2938
protein_id(GenBank) gb|AAG06326.1|AE004720_2|gnl|PseudoCAP|PA2938
TIGR NTL03PA02938
UniParc UPI00000C5895
UniProtKB Acc Q9HZQ9
UniProtKB ID Q9HZQ9_PSEAE
UniRef100 UniRef100_W0YUS5
UniRef50 UniRef50_A1RA36
UniRef90 UniRef90_B7V303

Product

Feature Type CDS
Coding Frame 1
Product Name
probable transporter
Product Name Confidence: Class 3
Synonyms
Evidence for Translation
Charge (pH 7) -0.15
Kyte-Doolittle Hydrophobicity Value 0.853
Molecular Weight (kDa) 50.0
Isoelectric Point (pI) 6.96

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Cytoplasmic Membrane Class 2
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 348 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002642 (466 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA2938

Human Homologs

References

Genome-wide identification of Pseudomonas aeruginosa exported proteins using a consensus computational strategy combined with a laboratory-based PhoA fusion screen.
Lewenza S, Gardy JL, Brinkman FS, Hancock RE
Genome Res 2005 Feb;15(2):321-9
PubMed ID: 15687295