Pseudomonas aeruginosa PAO1, PA2940

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Feature Overview

Strain Pseudomonas aeruginosa PAO1 (Stover et al., 2000)
GCF_000006765.1|latest
Locus Tag
PA2940
Name
Replicon chromosome
Genomic location 3295979 - 3297118 (- strand)
Transposon Mutants 3 transposon mutants in PAO1
Transposon Mutants in orthologs 1 transposon mutants in orthologs

Cross-References

RefSeq NP_251630.1
GI 15598136
Affymetrix PA2940_at
DNASU PaCD00007282
Entrez 882664
GenBank AAG06328.1
INSDC AAG06328.1
NCBI Locus Tag PA2940
protein_id(GenBank) gb|AAG06328.1|AE004720_4|gnl|PseudoCAP|PA2940
TIGR NTL03PA02940
UniParc UPI00000C5897
UniProtKB Acc Q9HZQ7
UniProtKB ID Q9HZQ7_PSEAE
UniRef100 UniRef100_Q9HZQ7
UniRef50 UniRef50_Q3IJ24
UniRef90 UniRef90_Q02PA3

Product

Feature Type CDS
Coding Frame 1
Product Name
probable acyl-CoA thiolase
Product Name Confidence: Class 3
Synonyms
Evidence for Translation
Charge (pH 7) -5.00
Kyte-Doolittle Hydrophobicity Value 0.267
Molecular Weight (kDa) 39.2
Isoelectric Point (pI) 5.45

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 2
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 484 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002640 (302 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA2940

Human Homologs

Ensembl 110, assembly GRCh38.p14
acetyl-CoA acyltransferase 2 [Source:HGNC Symbol;Acc:HGNC:83]
E-value: 2.5e-59
Percent Identity: 35.7

References

No references are associated with this feature.