Pseudomonas aeruginosa PAO1, PA2959

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Feature Overview

Strain Pseudomonas aeruginosa PAO1 (Stover et al., 2000)
GCF_000006765.1|latest
Locus Tag
PA2959
Name
Synonym: ycfH
Replicon chromosome
Genomic location 3318883 - 3319659 (- strand)
Transposon Mutants 2 transposon mutants in PAO1
Transposon Mutants in orthologs 1 transposon mutants in orthologs

Cross-References

RefSeq NP_251649.1
GI 15598155
Affymetrix PA2959_at
Entrez 879116
GenBank AAG06347.1
INSDC AAG06347.1
NCBI Locus Tag PA2959
protein_id(GenBank) gb|AAG06347.1|AE004722_3|gnl|PseudoCAP|PA2959
TIGR NTL03PA02959
UniParc UPI00000C58A9
UniProtKB Acc Q9HZN9
UniProtKB ID Q9HZN9_PSEAE
UniRef100 UniRef100_W0YUU8
UniRef50 UniRef50_A0A060UKM4
UniRef90 UniRef90_B7V170

Product

Feature Type CDS
Coding Frame 1
Product Name
conserved hypothetical protein
Product Name Confidence: Class 4
Synonyms
Evidence for Translation
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
Charge (pH 7) -10.23
Kyte-Doolittle Hydrophobicity Value 0.014
Molecular Weight (kDa) 28.1
Isoelectric Point (pI) 5.32

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 634 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002623 (535 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA2959

Human Homologs

Ensembl 110, assembly GRCh38.p14
TatD DNase domain containing 3 [Source:HGNC Symbol;Acc:HGNC:27010]
E-value: 9.9e-20
Percent Identity: 29.3

References

No references are associated with this feature.