Pseudomonas aeruginosa PAO1, PA3489

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Feature Overview

Strain Pseudomonas aeruginosa PAO1 (Stover et al., 2000)
GCF_000006765.1|latest
Locus Tag
PA3489
Name
Synonym: rnfA
Replicon chromosome
Genomic location 3907268 - 3907852 (+ strand)
Transposon Mutants 3 transposon mutants in PAO1
Transposon Mutants in orthologs 1 transposon mutants in orthologs

Cross-References

RefSeq NP_252179.1
GI 15598685
Affymetrix PA3489_at
DNASU PaCD00007533
Entrez 879985
GenBank AAG06877.1
INSDC AAG06877.1
NCBI Locus Tag PA3489
protein_id(GenBank) gb|AAG06877.1|AE004770_2|gnl|PseudoCAP|PA3489
TIGR NTL03PA03489
UniParc UPI0000134380
UniProtKB Acc Q9HYC0
UniProtKB ID ETCA_PSEAE
UniRef100 UniRef100_B7UWJ4
UniRef50 UniRef50_D5ARY9
UniRef90 UniRef90_B7UWJ4

Product

Feature Type CDS
Coding Frame 1
Product Name
conserved hypothetical protein
Product Name Confidence: Class 4
Synonyms
Evidence for Translation
Charge (pH 7) 5.13
Kyte-Doolittle Hydrophobicity Value 1.121
Molecular Weight (kDa) 20.9
Isoelectric Point (pI) 9.63

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 226 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002154 (371 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA3489

Human Homologs

References

Genome-wide identification of Pseudomonas aeruginosa exported proteins using a consensus computational strategy combined with a laboratory-based PhoA fusion screen.
Lewenza S, Gardy JL, Brinkman FS, Hancock RE
Genome Res 2005 Feb;15(2):321-9
PubMed ID: 15687295
Identification of a new class of nitrogen fixation genes in Rhodobacter capsulatus: a putative membrane complex involved in electron transport to nitrogenase.
Schmehl M, Jahn A, Meyer zu Vilsendorf A, Hennecke S, Masepohl B, Schuppler M, Marxer M, Oelze J, Klipp W
Mol Gen Genet 1993 Dec;241(5-6):602-15
PubMed ID: 8264535
Overexpression in Escherichia coli of the rnf genes from Rhodobacter capsulatus--characterization of two membrane-bound iron-sulfur proteins.
Jouanneau Y, Jeong HS, Hugo N, Meyer C, Willison JC
Eur J Biochem 1998 Jan 15;251(1-2):54-64
PubMed ID: 9492268