Pseudomonas aeruginosa PAO1, PA3600 (rpmJ2)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Feature Overview

Strain Pseudomonas aeruginosa PAO1 (Stover et al., 2000)
GCF_000006765.1|latest
Locus Tag
PA3600
Name
rpmJ2
Synonym: rpl36
Replicon chromosome
Genomic location 4035606 - 4035758 (- strand)
Transposon Mutants 1 transposon mutants in PAO1

Cross-References

RefSeq NP_252290.1
GI 15598796
Affymetrix PA3600_at
DNASU PaCD00007575
Entrez 880142
GenBank AAG06988.1
INSDC AAG06988.1
NCBI Locus Tag PA3600
protein_id(GenBank) gb|AAG06988.1|AE004780_7|gnl|PseudoCAP|PA3600
TIGR NTL03PA03600
UniParc UPI0000132FDA
UniProtKB Acc Q9HY26
UniProtKB ID RL362_PSEAE
UniRef100 UniRef100_A6V1J0
UniRef50 UniRef50_P28528
UniRef90 UniRef90_A6V1J0

Product

Feature Type CDS
Coding Frame 1
Product Name
RpmJ2
Product Name Confidence: Class 2
Synonyms
Evidence for Translation
Charge (pH 7) 17.12
Kyte-Doolittle Hydrophobicity Value -0.876
Molecular Weight (kDa) 6.0
Isoelectric Point (pI) 12.26

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 167 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002074 (315 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA3600
Search term: rpmJ2
Search term: RpmJ2

Human Homologs

References

Zinc-responsive regulation of alternative ribosomal protein genes in Streptomyces coelicolor involves zur and sigmaR.
Owen GA, Pascoe B, Kallifidas D, Paget MS
J Bacteriol 2007 Jun;189(11):4078-86
PubMed ID: 17400736