Strain |
Pseudomonas aeruginosa PAO1 (Stover et al., 2000)
GCF_000006765.1|latest |
Locus Tag |
PA1953
|
Name |
fapD
|
Replicon | chromosome |
Genomic location | 2138612 - 2139292 (- strand) |
Transposon Mutants | 2 transposon mutants in PAO1 |
Transposon Mutants in orthologs | 4 transposon mutants in orthologs |
RefSeq | NP_250643.1 |
GI | 15597149 |
Affymetrix | PA1953_at |
DNASU | PaCD00006874 |
Entrez | 880801 |
GenBank | AAG05341.1 |
INSDC | AAG05341.1 |
NCBI Locus Tag | PA1953 |
protein_id(GenBank) | gb|AAG05341.1|AE004622_3|gnl|PseudoCAP|PA1953 |
TIGR | NTL03PA01953 |
UniParc | UPI00000C5529 |
UniProtKB Acc | Q9I2F1 |
UniProtKB ID | Q9I2F1_PSEAE |
UniRef100 | UniRef100_Q9I2F1 |
UniRef50 | UniRef50_G8PYP8 |
UniRef90 | UniRef90_Q9I2F1 |
Feature Type | CDS |
Coding Frame | 1 |
Product Name |
FapD
|
Synonyms | |
Evidence for Translation | |
Charge (pH 7) | 1.68 |
Kyte-Doolittle Hydrophobicity Value | -0.014 |
Molecular Weight (kDa) | 25.3 |
Isoelectric Point (pI) | 8.40 |
Individual Mappings | |
Additional evidence for subcellular localization |
Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 135 genera
|
Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
Pseudomonas Ortholog Group |
POG003479 (780 members) |
Putative Inparalogs | None Found |
STRING database | Search for predicted protein-protein interactions using:
Search term: PA1953
Search term: fapD
Search term: FapD
|
Genome-wide identification of Pseudomonas aeruginosa exported proteins using a consensus computational strategy combined with a laboratory-based PhoA fusion screen.
Lewenza S, Gardy JL, Brinkman FS, Hancock RE
Genome Res 2005 Feb;15(2):321-9
PubMed ID: 15687295
|
Functional amyloid in Pseudomonas.
Dueholm MS, Petersen SV, Sønderkær M, Larsen P, Christiansen G, Hein KL, Enghild JJ, Nielsen JL, Nielsen KL, Nielsen PH, Otzen DE
Mol Microbiol 2010 Aug;77(4):1009-20
PubMed ID: 20572935
|
Expression of Fap amyloids in Pseudomonas aeruginosa, P. fluorescens, and P. putida results in aggregation and increased biofilm formation.
Dueholm MS, Søndergaard MT, Nilsson M, Christiansen G, Stensballe A, Overgaard MT, Givskov M, Tolker-Nielsen T, Otzen DE, Nielsen PH
Microbiologyopen 2013 Jun;2(3):365-82
PubMed ID: 23504942
|