Pseudomonas aeruginosa PAO1, PA3032 (snr1)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Feature Overview

Strain Pseudomonas aeruginosa PAO1 (Stover et al., 2000)
GCF_000006765.1|latest
Locus Tag
PA3032
Name
snr1
Replicon chromosome
Genomic location 3395325 - 3396728 (- strand)
Transposon Mutants 3 transposon mutants in PAO1
Transposon Mutants in orthologs 1 transposon mutants in orthologs

Cross-References

RefSeq NP_251722.1
GI 15598228
Affymetrix PA3032_at
Entrez 878993
GenBank AAG06420.1
INSDC AAG06420.1
NCBI Locus Tag PA3032
protein_id(GenBank) gb|AAG06420.1|AE004728_6|gnl|PseudoCAP|PA3032
TIGR NTL03PA03032
UniParc UPI00000C58D9
UniProtKB Acc Q9HZH6
UniProtKB ID Q9HZH6_PSEAE
UniRef100 UniRef100_Q9HZH6
UniRef50 UniRef50_Q9HZH6
UniRef90 UniRef90_Q9HZH6

Product

Feature Type CDS
Coding Frame 1
Product Name
cytochrome c Snr1
Product Name Confidence: Class 1
Synonyms cytochrome c Hsc
Evidence for Translation
Charge (pH 7) -1.73
Kyte-Doolittle Hydrophobicity Value -0.438
Molecular Weight (kDa) 52.5
Isoelectric Point (pI) 6.76

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown (This protein may have multiple localization sites) Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 86 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002553 (303 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA3032
Search term: snr1
Search term: cytochrome c Snr1

Human Homologs

References

Genome-wide identification of Pseudomonas aeruginosa exported proteins using a consensus computational strategy combined with a laboratory-based PhoA fusion screen.
Lewenza S, Gardy JL, Brinkman FS, Hancock RE
Genome Res 2005 Feb;15(2):321-9
PubMed ID: 15687295
snr-1 gene is required for nitrate reduction in Pseudomonas aeruginosa PAO1.
Kerschen EJ, Irani VR, Hassett DJ, Rowe JJ
J Bacteriol 2001 Mar;183(6):2125-31
PubMed ID: 11222615
Snr, new genetic loci common to the nitrate reduction systems of Pseudomonas aeruginosa PAO1.
Irani VR, Darzins A, Rowe JJ
Curr Microbiol 1997 Jul;35(1):9-13
PubMed ID: 9175552
Purification, characterization and gene sequence analysis of a novel cytochrome c co-induced with reductive dechlorination activity in Desulfomonile tiedjei DCB-1.
Louie TM, Ni S, Xun L, Mohn WW
Arch Microbiol 1997 Dec;168(6):520-7
PubMed ID: 9385144