Pseudomonas aeruginosa PAO1, PA4305 (rcpC)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Feature Overview

Strain Pseudomonas aeruginosa PAO1 (Stover et al., 2000)
GCF_000006765.1|latest
Locus Tag
PA4305
Name
rcpC
Synonym: rcpC
Replicon chromosome
Genomic location 4829643 - 4830554 (- strand)
Transposon Mutants 2 transposon mutants in PAO1
Transposon Mutants in orthologs 2 transposon mutants in orthologs

Cross-References

RefSeq NP_252995.1
GI 15599501
Affymetrix PA4305_at
Entrez 881571
GenBank AAG07693.1
INSDC AAG07693.1
NCBI Locus Tag PA4305
protein_id(GenBank) gb|AAG07693.1|AE004846_10|gnl|PseudoCAP|PA4305
TIGR NTL03PA04306
UniParc UPI00000C5CAA
UniProtKB Acc Q9HW95
UniProtKB ID Q9HW95_PSEAE
UniRef100 UniRef100_Q9HW95
UniRef50 UniRef50_Q9HW95
UniRef90 UniRef90_Q9HW95

Product

Feature Type CDS
Coding Frame 1
Product Name
RcpC
Product Name Confidence: Class 2
Synonyms RcpC
Evidence for Translation
Charge (pH 7) -0.51
Kyte-Doolittle Hydrophobicity Value 0.049
Molecular Weight (kDa) 31.8
Isoelectric Point (pI) 6.57

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 96 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG003906 (451 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA4305
Search term: rcpC
Search term: RcpC

Human Homologs

References

Genome-wide identification of Pseudomonas aeruginosa exported proteins using a consensus computational strategy combined with a laboratory-based PhoA fusion screen.
Lewenza S, Gardy JL, Brinkman FS, Hancock RE
Genome Res 2005 Feb;15(2):321-9
PubMed ID: 15687295
FppA, a novel Pseudomonas aeruginosa prepilin peptidase involved in assembly of type IVb pili.
de Bentzmann S, Aurouze M, Ball G, Filloux A
J Bacteriol 2006 Jul;188(13):4851-60
PubMed ID: 16788194
Mutation analysis of the flp operon in Actinobacillus actinomycetemcomitans.
Wang Y, Chen C
Gene 2005 May 23;351:61-71
PubMed ID: 15837433