Pseudomonas syringae pv. tomato DC3000, PSPTO_4176 (aauR)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003)
GCF_000007805.1|latest
Locus Tag
PSPTO_4176
NCBI Old Locus TagPSPTO4176
Name
aauR
Synonym: PSPTO4176
Replicon chromosome
Genomic location 4704777 - 4706105 (+ strand)

Cross-References

RefSeq NP_793937.1
GI 28871318
Entrez 1185856
INSDC AAO57632.1
NCBI Locus Tag PSPTO_4176
NCBI Old Locus Tag PSPTO4176
UniParc UPI0000009207
UniProtKB Acc Q87XK2
UniProtKB ID Q87XK2_PSESM
UniRef100 UniRef100_Q87XK2
UniRef50 UniRef50_P13632
UniRef90 UniRef90_Q48EZ3

Product

Feature Type CDS
Coding Frame 1
Product Name
sigma-54 dependent transcriptional regulator/response regulator
Product Name Confidence: Class 2
Synonyms
Evidence for Translation
Charge (pH 7) -8.16
Kyte-Doolittle Hydrophobicity Value -0.197
Molecular Weight (kDa) 48.9
Isoelectric Point (pI) 5.40

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 615 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001271 (497 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPTO_4176
Search term: aauR

Human Homologs

References

Characterization of a Pseudomonas putida ABC transporter (AatJMQP) required for acidic amino acid uptake: biochemical properties and regulation by the Aau two-component system.
Singh B, Röhm KH
Microbiology (Reading) 2008 Mar;154(Pt 3):797-809
PubMed ID: 18310026