Pseudomonas aeruginosa PAO1, PA0085 (hcp1)

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments

Functional Classifications Manually Assigned by PseudoCAP

Secreted Factors (toxins, enzymes, alginate) Other PAO1 genes in this class

Pathways

Database	Xref	Pathway	Version	Evidence	PMID
KEGG	pae03070	Bacterial secretion system	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion
KEGG	pae02025	Biofilm formation - Pseudomonas aeruginosa	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
Pfam	PF05638	Type VI secretion system effector, Hcp	IPR008514	Type VI secretion system effector, Hcp	6	136	1.4E-43
Gene3D	G3DSA:2.30.110.20		IPR036624	Hcp1-like superfamily	1	162	1.6E-74
TIGRFAM	TIGR03344	VI_effect_Hcp1: type VI secretion system effector, Hcp1 family	IPR008514	Type VI secretion system effector, Hcp	13	144	9.0E-17
SUPERFAMILY	SSF141452		IPR036624	Hcp1-like superfamily	2	160	2.88E-58

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.