Pseudomonas aeruginosa PAO1, PA1194

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0055085 transmembrane transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF13520
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF13520
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0022857 transmembrane transporter activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF13520
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006865 amino acid transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00905
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Transport of small molecules Other PAO1 genes in this class
Membrane proteins Other PAO1 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PANTHER PTHR42770 AMINO ACID TRANSPORTER-RELATED - - 3 438 9.5E-76
Pfam PF13520 Amino acid permease IPR002293 Amino acid/polyamine transporter I 9 412 1.7E-57
PIRSF PIRSF006060 AA_transporter - - 1 470 1.5E-44
NCBIfam TIGR00905 JCVI: basic amino acid/polyamine antiporter IPR004754 Amino acid antiporter 1 472 0.0
Gene3D G3DSA:1.20.1740.10 Amino acid/polyamine transporter I - - 4 441 6.1E-58

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.