Pseudomonas aeruginosa PAO1, PA1251
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Molecular Function | GO:0004888 | transmembrane signaling receptor activity |
Inferred from Sequence Model
Term mapped from: InterPro:PR00260
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
| Biological Process | GO:0006935 | chemotaxis |
Inferred from Sequence Model
Term mapped from: InterPro:PR00260
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
| Cellular Component | GO:0016020 | membrane |
Inferred from Sequence Model
Term mapped from: InterPro:PF00672
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
| Biological Process | GO:0007165 | signal transduction |
Inferred from Sequence Model
Term mapped from: InterPro:PF00672
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Pathways
| Database | Xref | Pathway | Version | Evidence | PMID |
|---|---|---|---|---|---|
| PseudoCAP | Chemotactic transducer (MCP) |
ECO:0000037
not_recorded |
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| SMART | SM00304 | HAMP_11 | IPR003660 | HAMP domain | 267 | 317 | 72.0 |
| Pfam | PF12729 | Four helix bundle sensory module for signal transduction | IPR024478 | Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain | 8 | 185 | 7.2E-22 |
| PANTHER | PTHR32089 | METHYL-ACCEPTING CHEMOTAXIS PROTEIN MCPB | - | - | 27 | 539 | 5.1E-107 |
| Pfam | PF00672 | HAMP domain | IPR003660 | HAMP domain | 209 | 261 | 2.1E-5 |
| CDD | cd11386 | MCP_signal | - | - | 306 | 497 | 1.97089E-48 |
| FunFam | G3DSA:1.10.287.950:FF:000001 | Methyl-accepting chemotaxis sensory transducer | - | - | 212 | 541 | 1.4E-91 |
| PRINTS | PR00260 | Bacterial chemotaxis sensory transducer signature | IPR004090 | Chemotaxis methyl-accepting receptor | 16 | 41 | 1.3E-22 |
| Pfam | PF00015 | Methyl-accepting chemotaxis protein (MCP) signalling domain | IPR004089 | Methyl-accepting chemotaxis protein (MCP) signalling domain | 324 | 507 | 4.7E-42 |
| SMART | SM00304 | HAMP_11 | IPR003660 | HAMP domain | 212 | 264 | 2.0E-8 |
| Gene3D | G3DSA:1.10.287.950 | - | - | - | 293 | 541 | 5.1E-55 |
| PRINTS | PR00260 | Bacterial chemotaxis sensory transducer signature | IPR004090 | Chemotaxis methyl-accepting receptor | 377 | 404 | 1.3E-22 |
| Coils | Coil | Coil | - | - | 442 | 462 | - |
| PRINTS | PR00260 | Bacterial chemotaxis sensory transducer signature | IPR004090 | Chemotaxis methyl-accepting receptor | 406 | 435 | 1.3E-22 |
| Gene3D | G3DSA:6.10.340.10 | - | - | - | 172 | 268 | 9.4E-17 |
| Coils | Coil | Coil | - | - | 81 | 101 | - |
| SUPERFAMILY | SSF58104 | Methyl-accepting chemotaxis protein (MCP) signaling domain | - | - | 232 | 540 | 5.75E-73 |
| CDD | cd19411 | MCP2201-like_sensor | IPR047347 | Putative sensory transducer protein YvaQ-like, ligand-binding sensor domain | 44 | 172 | 1.2875E-10 |
| SMART | SM00283 | MA_2 | IPR004089 | Methyl-accepting chemotaxis protein (MCP) signalling domain | 279 | 540 | 6.7E-76 |
| CDD | cd06225 | HAMP | - | - | 217 | 259 | 0.00233683 |
| PRINTS | PR00260 | Bacterial chemotaxis sensory transducer signature | IPR004090 | Chemotaxis methyl-accepting receptor | 188 | 208 | 1.3E-22 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.