Strain |
Pseudomonas aeruginosa PAO1 (Stover et al., 2000)
GCF_000006765.1|latest |
Locus Tag |
PA1294
|
Name |
rnd
|
Replicon | chromosome |
Genomic location | 1405338 - 1406462 (+ strand) |
Transposon Mutants | 3 transposon mutants in PAO1 |
Transposon Mutants in orthologs | 1 transposon mutants in orthologs |
RefSeq | NP_249985.1 |
GI | 15596491 |
Affymetrix | PA1294_rnd_at |
Entrez | 881579 |
GenBank | AAG04683.1 |
INSDC | AAG04683.1 |
NCBI Locus Tag | PA1294 |
protein_id(GenBank) | gb|AAG04683.1|AE004559_2|gnl|PseudoCAP|PA1294 |
TIGR | NTL03PA01295 |
UniParc | UPI00000C52F5 |
UniProtKB Acc | Q9I450 |
UniProtKB ID | Q9I450_PSEAE |
UniRef100 | UniRef100_W0YLI0 |
UniRef50 | UniRef50_A6V8R6 |
UniRef90 | UniRef90_A6V8R6 |
Feature Type | CDS |
Coding Frame | 1 |
Product Name |
ribonuclease D
|
Synonyms | |
Evidence for Translation |
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
|
Charge (pH 7) | -12.89 |
Kyte-Doolittle Hydrophobicity Value | -0.399 |
Molecular Weight (kDa) | 43.1 |
Isoelectric Point (pI) | 4.79 |
Individual Mappings | |
Additional evidence for subcellular localization |
Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 285 genera
|
Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
Pseudomonas Ortholog Group |
POG001238 (536 members) |
Putative Inparalogs | None Found |
STRING database | Search for predicted protein-protein interactions using:
Search term: PA1294
Search term: rnd
Search term: ribonuclease D
|
Escherichia coli RNase D: sequencing of the rnd structural gene and purification of the overexpressed protein.
Zhang JR, Deutscher MP
Nucleic Acids Res 1988 Jul 25;16(14A):6265-78
PubMed ID: 3041371
|