Pseudomonas aeruginosa PAO1, PA1317 (cyoA)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Cellular Component GO:0009319 cytochrome o ubiquinol oxidase complex
ISS
Inferred from Sequence or Structural Similarity 		ECO:0000250
sequence similarity evidence used in manual assertion		 2162835 Reviewed by curator
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00116
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0005507 copper ion binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00116
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0004129 cytochrome-c oxidase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR22888
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0022900 electron transport chain
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF06481
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0009486 cytochrome bo3 ubiquinol oxidase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF06481
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF000292
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Energy metabolism Other PAO1 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pae00190 Oxidative phosphorylation 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pae01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PANTHER PTHR22888 CYTOCHROME C OXIDASE, SUBUNIT II IPR045187 Cytochrome c/quinol oxidase subunit II 23 239 3.6E-36
SUPERFAMILY SSF81464 Cytochrome c oxidase subunit II-like, transmembrane region IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily 26 116 3.43E-23
CDD cd04212 CuRO_UO_II IPR034227 Ubiquinol oxidase subunit 2, cupredoxin domain 126 224 6.6905E-65
Gene3D G3DSA:2.60.40.420 - IPR008972 Cupredoxin 112 279 1.2E-48
NCBIfam TIGR01433 JCVI: ubiquinol oxidase subunit II IPR006333 Cytochrome o ubiquinol oxidase subunit II 15 237 1.1E-116
Gene3D G3DSA:1.10.287.90 - IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily 26 111 6.6E-32
FunFam G3DSA:1.10.287.90:FF:000002 Ubiquinol oxidase subunit 2 - - 26 111 1.4E-43
Pfam PF06481 COX Aromatic Rich Motif IPR010514 COX aromatic rich motif 237 282 4.9E-15
SUPERFAMILY SSF49503 Cupredoxins IPR008972 Cupredoxin 119 278 2.43E-49
PIRSF PIRSF000292 Ubiqnol_oxid_II IPR006333 Cytochrome o ubiquinol oxidase subunit II 1 310 0.0
FunFam G3DSA:2.60.40.420:FF:000008 Ubiquinol oxidase subunit 2 - - 112 279 3.5E-85
Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain IPR002429 Cytochrome c oxidase subunit II-like C-terminal 148 217 4.7E-7

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.