Pseudomonas aeruginosa PAO1, PA3874 (narH)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0006091 generation of precursor metabolites and energy
ISS
Inferred from Sequence or Structural Similarity 		ECO:0000044
sequence similarity evidence
Biological Process GO:0006807 nitrogen compound metabolic process
ISS
Inferred from Sequence or Structural Similarity 		ECO:0000044
sequence similarity evidence
Molecular Function GO:0004455 ketol-acid reductoisomerase activity
ISS
Inferred from Sequence or Structural Similarity 		ECO:0000044
sequence similarity evidence
Biological Process GO:0042126 nitrate metabolic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd10557
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0008940 nitrate reductase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd10557
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0009325 nitrate reductase complex
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd10557
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Energy metabolism Other PAO1 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pae00910 Nitrogen metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
PseudoCAP Nitrogen metabolism ECO:0000037
not_recorded
KEGG pae02020 Two-component system 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pae01120 Microbial metabolism in diverse environments 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
FunFam G3DSA:3.30.70.20:FF:000005 Respiratory nitrate reductase beta subunit - - 157 240 1.2E-54
Gene3D G3DSA:3.30.70.20 - - - 5 89 9.7E-7
FunFam G3DSA:3.30.70.20:FF:000008 Respiratory nitrate reductase beta subunit - - 241 362 4.6E-71
CDD cd10557 NarH_beta-like IPR006547 Nitrate reductase, beta subunit 3 367 0.0
Pfam PF14711 Respiratory nitrate reductase beta C-terminal IPR029263 Respiratory nitrate reductase beta, C-terminal 358 435 1.5E-29
Gene3D G3DSA:1.10.3650.10 nitrate reductase domain like IPR038262 Nitrate reductase beta, C-terminal domain superfamily 363 434 5.2E-31
FunFam G3DSA:3.30.70.20:FF:000010 Respiratory nitrate reductase beta subunit - - 5 90 9.5E-52
SUPERFAMILY SSF54862 4Fe-4S ferredoxins - - 1 487 0.0
PANTHER PTHR43518 NITRATE REDUCTASE BETA SUBUNIT - - 1 510 0.0
Gene3D G3DSA:3.30.70.20 - - - 158 240 9.4E-23
FunFam G3DSA:1.10.3650.10:FF:000001 Respiratory nitrate reductase subunit beta - - 362 434 4.0E-32
Gene3D G3DSA:3.30.70.20 - - - 241 362 3.9E-57
Pfam PF13247 4Fe-4S dicluster domain IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain 175 271 8.5E-38
NCBIfam TIGR01660 JCVI: nitrate reductase subunit beta IPR006547 Nitrate reductase, beta subunit 1 490 0.0

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.