Pseudomonas aeruginosa PAO1, PA3919
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Upstream Motifs
*Up to 500bp upstream
| Name | Start | Stop | Strand | Evidence | PMID | |
|---|---|---|---|---|---|---|
| CueR binding site | 4389128 | 4389161 | + |
ECO:0000314
direct assay evidence used in manual assertion |
22510163 | Details |
| Shine-Dalgarno sequence | 4388737 | 4388739 | - |
ECO:0000256
match to sequence model evidence used in automatic assertion |
Details | |
| Shine-Dalgarno sequence | 4389221 | 4389226 | + |
ECO:0000256
match to sequence model evidence used in automatic assertion |
Details |
Downstream motifs
*Up to 500bp downstream
| Name | Start | Stop | Strand | Evidence | PMID | |
|---|---|---|---|---|---|---|
| Inverted repeat: GGCCCGGTCC-N2-GGACCGGGCC | 4387243 | 4387264 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Inverted repeat: ATATCCCGCCCGG-N9-CCGGGCGGGATAT | 4387276 | 4387310 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |