Pseudomonas aeruginosa PAO1, PA3965

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Molecular Function	GO:0043565	sequence-specific DNA binding	ISM Inferred from Sequence Model Term mapped from: InterPro:PR00033	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Transcriptional regulators Other PAO1 genes in this class

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
FunFam	G3DSA:1.10.10.10:FF:000104	AsnC family transcriptional regulator	-	-	15	66	1.4E-34
Gene3D	G3DSA:3.30.70.920	-	-	-	67	152	1.3E-27
PANTHER	PTHR30154	LEUCINE-RESPONSIVE REGULATORY PROTEIN	-	-	11	161	1.3E-42
SUPERFAMILY	SSF46785	Winged helix DNA-binding domain	IPR036390	Winged helix DNA-binding domain superfamily	5	132	3.13E-22
Pfam	PF01037	Lrp/AsnC ligand binding domain	IPR019887	Transcription regulator AsnC/Lrp, ligand binding domain	80	155	4.5E-22
PRINTS	PR00033	AsnC bacterial regulatory protein HTH signature	IPR000485	AsnC-type HTH domain	14	30	3.2E-19
FunFam	G3DSA:3.30.70.920:FF:000008	Transcriptional regulator, AsnC family	-	-	67	152	3.8E-35
PRINTS	PR00033	AsnC bacterial regulatory protein HTH signature	IPR000485	AsnC-type HTH domain	30	41	3.2E-19
CDD	cd00090	HTH_ARSR	IPR011991	ArsR-like helix-turn-helix domain	15	63	1.84291E-8
Pfam	PF13412	Winged helix-turn-helix DNA-binding	-	-	14	60	4.0E-23
SMART	SM00344	asnc	IPR019888	Transcription regulator AsnC-like	14	124	2.0E-43
Gene3D	G3DSA:1.10.10.10	-	IPR036388	Winged helix-like DNA-binding domain superfamily	15	66	6.3E-25
PRINTS	PR00033	AsnC bacterial regulatory protein HTH signature	IPR000485	AsnC-type HTH domain	41	60	3.2E-19

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.