Pseudomonas aeruginosa PAO1, PA4084 (cupB3)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0005515 protein binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF13954
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR30451
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0009297 pilus assembly
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR30451
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0015473 fimbrial usher porin activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR30451
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Motility & Attachment Other PAO1 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF13954 PapC N-terminal domain IPR025885 PapC, N-terminal domain 19 172 2.8E-37
MobiDBLite mobidb-lite consensus disorder prediction - - 581 600 -
Pfam PF13953 PapC C-terminal domain IPR025949 PapC-like, C-terminal domain 754 819 2.6E-18
MobiDBLite mobidb-lite consensus disorder prediction - - 609 623 -
FunFam G3DSA:2.60.40.3110:FF:000001 Putative fimbrial outer membrane usher - - 257 346 8.5E-33
Gene3D G3DSA:2.60.40.2610 Outer membrane usher protein FimD, plug domain IPR042186 Outer membrane usher protein FimD, plug domain 661 749 2.3E-23
PANTHER PTHR30451 OUTER MEMBRANE USHER PROTEIN IPR000015 Outer membrane usher protein 11 831 0.0
MobiDBLite mobidb-lite consensus disorder prediction - - 581 597 -
Gene3D G3DSA:3.10.20.410 - IPR037224 PapC, N-terminal domain superfamily 17 147 1.1E-21
Gene3D G3DSA:2.60.40.3110 - - - 257 346 1.2E-32
SUPERFAMILY SSF141729 FimD N-terminal domain-like IPR037224 PapC, N-terminal domain superfamily 17 145 8.89E-24
Gene3D G3DSA:2.60.40.2070 - IPR043142 PapC-like, C-terminal domain superfamily 753 841 6.3E-17
Pfam PF00577 Outer membrane usher protein IPR000015 Outer membrane usher protein 187 743 0.0
MobiDBLite mobidb-lite consensus disorder prediction - - 607 627 -

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.