Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
---|---|---|---|---|---|---|
Biological Process | GO:0006355 | regulation of transcription, DNA-templated |
Inferred from Sequence Model
Term mapped from: InterPro:PF02311
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Molecular Function | GO:0003700 | DNA-binding transcription factor activity |
Inferred from Sequence Model
Term mapped from: InterPro:PR00032
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Molecular Function | GO:0043565 | sequence-specific DNA binding |
Inferred from Sequence Model
Term mapped from: InterPro:PF12833
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
|
Database | Xref | Pathway | Version | Evidence | PMID |
---|---|---|---|---|---|
PseudoCAP | Aromatic compound catabolism |
ECO:0000037
not_recorded |
Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
---|---|---|---|---|---|---|---|
Pfam | PF02311 | AraC-like ligand binding domain | IPR003313 | AraC-type arabinose-binding/dimerisation domain | 32 | 167 | 9.5E-15 |
PRINTS | PR00032 | AraC bacterial regulatory protein HTH signature | IPR020449 | Transcription regulator HTH, AraC- type | 277 | 293 | 6.2E-6 |
NCBIfam | TIGR02297 | JCVI: 4-hydroxyphenylacetate catabolism regulatory protein HpaA | IPR011983 | 4-hydroxyphenylacetate catabolism regulatory protein HpaA | 7 | 295 | 0.0 |
PANTHER | PTHR43280 | ARAC-FAMILY TRANSCRIPTIONAL REGULATOR | - | - | 45 | 296 | 2.9E-24 |
Gene3D | G3DSA:2.60.120.10 | Jelly Rolls | IPR014710 | RmlC-like jelly roll fold | 37 | 106 | 2.5E-7 |
SUPERFAMILY | SSF46689 | Homeodomain-like | IPR009057 | Homeobox-like domain superfamily | 248 | 295 | 7.62E-12 |
SMART | SM00342 | aracneu4 | IPR018060 | DNA binding HTH domain, AraC-type | 210 | 293 | 3.9E-17 |
CDD | cd06999 | cupin_HpaA-like_N | IPR047264 | HpaA-like, N-terminal cupin domain | 10 | 104 | 1.47471E-32 |
Gene3D | G3DSA:1.10.10.60 | - | - | - | 191 | 302 | 1.7E-21 |
PRINTS | PR00032 | AraC bacterial regulatory protein HTH signature | IPR020449 | Transcription regulator HTH, AraC- type | 262 | 277 | 6.2E-6 |
Pfam | PF12833 | Helix-turn-helix domain | IPR018060 | DNA binding HTH domain, AraC-type | 216 | 295 | 6.6E-17 |
SUPERFAMILY | SSF51182 | RmlC-like cupins | IPR011051 | RmlC-like cupin domain superfamily | 38 | 120 | 1.6E-10 |