Pseudomonas aeruginosa PAO1, PA4133

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0006091 generation of precursor metabolites and energy
ISS
Inferred from Sequence or Structural Similarity 		ECO:0000044
sequence similarity evidence
Biological Process GO:0009399 nitrogen fixation
ISS
Inferred from Sequence or Structural Similarity 		ECO:0000250
sequence similarity evidence used in manual assertion		 8386371 Reviewed by curator
Molecular Function GO:0020037 heme binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00115
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0004129 cytochrome-c oxidase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00115
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00115
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0045278 plasma membrane respiratory chain complex IV
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00780
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0009060 aerobic respiration
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00115
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Energy metabolism Other PAO1 genes in this class
Adaptation, Protection Other PAO1 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pae01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pae02020 Two-component system 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pae00190 Oxidative phosphorylation 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:1.20.210.10 - IPR036927 Cytochrome c oxidase-like, subunit I superfamily 1 469 0.0
NCBIfam TIGR00780 JCVI: cytochrome-c oxidase, cbb3-type subunit I IPR004677 Cytochrome c oxidase cbb3-type, subunit I 9 463 0.0
PANTHER PTHR10422 CYTOCHROME C OXIDASE SUBUNIT 1 IPR000883 Cytochrome c oxidase subunit I 11 464 6.0E-64
Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I IPR000883 Cytochrome c oxidase subunit I 13 442 3.1E-110
FunFam G3DSA:1.20.210.10:FF:000005 Cytochrome c oxidase, cbb3-type, subunit I - - 1 469 0.0
SUPERFAMILY SSF81442 Cytochrome c oxidase subunit I-like IPR036927 Cytochrome c oxidase-like, subunit I superfamily 10 466 2.62E-119

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.