Pseudomonas aeruginosa PAO1, PA4247 (rplR)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0006412 translation
ISS
Inferred from Sequence or Structural Similarity 		ECO:0000250
sequence similarity evidence used in manual assertion		 1098937 Reviewed by curator
Biological Process GO:0044267 cellular protein metabolic process
ISS
Inferred from Sequence or Structural Similarity 		ECO:0000044
sequence similarity evidence
Biological Process GO:0006412 translation
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00060
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0005840 ribosome
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00060
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003735 structural constituent of ribosome
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00060
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Translation, post-translational modification, degradation Other PAO1 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pae03010 Ribosome 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
FunFam G3DSA:3.30.420.100:FF:000001 50S ribosomal protein L18 - - 2 116 1.4E-48
CDD cd00432 Ribosomal_L18_L5e - - 26 114 1.30638E-39
Gene3D G3DSA:3.30.420.100 - - - 3 116 3.3E-43
PANTHER PTHR12899 39S RIBOSOMAL PROTEIN L18, MITOCHONDRIAL IPR005484 Large ribosomal subunit protein uL18 5 116 5.0E-26
Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. IPR004389 Large ribosomal subunit protein uL18, bacterial-type 3 116 27.194698
SUPERFAMILY SSF53137 Translational machinery components - - 4 114 3.71E-52
Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast IPR005484 Large ribosomal subunit protein uL18 4 116 2.6E-42
NCBIfam TIGR00060 JCVI: 50S ribosomal protein L18 IPR004389 Large ribosomal subunit protein uL18, bacterial-type 4 116 9.8E-42

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.