Pseudomonas aeruginosa PAO1, PA4249 (rpsH)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0006412 translation
ISS
Inferred from Sequence or Structural Similarity 		ECO:0000250
sequence similarity evidence used in manual assertion		 1735715 Reviewed by curator
Biological Process GO:0044267 cellular protein metabolic process
ISS
Inferred from Sequence or Structural Similarity 		ECO:0000044
sequence similarity evidence
Biological Process GO:0006412 translation
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_01302_B
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003735 structural constituent of ribosome
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_01302_B
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0005840 ribosome
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_01302_B
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Translation, post-translational modification, degradation Other PAO1 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pae03010 Ribosome 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PANTHER PTHR11758 40S RIBOSOMAL PROTEIN S15A IPR000630 Small ribosomal subunit protein uS8 1 128 1.8E-23
FunFam G3DSA:3.30.1490.10:FF:000001 30S ribosomal protein S8 - - 73 130 5.7E-29
Pfam PF00410 Ribosomal protein S8 IPR000630 Small ribosomal subunit protein uS8 5 130 2.4E-49
Gene3D G3DSA:3.30.1370.30 - - - 2 72 1.3E-29
Gene3D G3DSA:3.30.1490.10 - - - 73 129 6.9E-26
SUPERFAMILY SSF56047 Ribosomal protein S8 IPR035987 Small ribosomal subunit protein uS8 superfamily 2 130 5.49E-47
Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. IPR000630 Small ribosomal subunit protein uS8 2 130 31.876654
FunFam G3DSA:3.30.1370.30:FF:000003 30S ribosomal protein S8 - - 2 72 1.9E-38

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.