Pseudomonas aeruginosa PAO1, PA4250 (rpsN)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0044267 cellular protein metabolic process
ISS
Inferred from Sequence or Structural Similarity 		ECO:0000044
sequence similarity evidence
Biological Process GO:0006412 translation
ISS
Inferred from Sequence or Structural Similarity 		ECO:0000250
sequence similarity evidence used in manual assertion		 6222285 Reviewed by curator
Biological Process GO:0006412 translation
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR19836
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0005840 ribosome
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR19836
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003735 structural constituent of ribosome
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR19836
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Translation, post-translational modification, degradation Other PAO1 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pae03010 Ribosome 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:1.10.287.1480 - - - 1 91 4.7E-31
PANTHER PTHR19836 30S RIBOSOMAL PROTEIN S14 IPR001209 Small ribosomal subunit protein uS14 1 101 2.2E-27
SUPERFAMILY SSF57716 Glucocorticoid receptor-like (DNA-binding domain) - - 2 101 1.14E-37
FunFam G3DSA:1.10.287.1480:FF:000001 30S ribosomal protein S14 - - 1 91 1.0E-34
Pfam PF00253 Ribosomal protein S14p/S29e IPR001209 Small ribosomal subunit protein uS14 48 100 1.1E-24
Coils Coil Coil - - 8 28 -
Hamap MF_00537 30S ribosomal protein S14 [rpsN]. IPR023036 Small ribosomal subunit protein uS14, bacteria/plastid 1 101 26.573219

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.