Pseudomonas aeruginosa PAO1, PA4259 (rpsS)

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Biological Process	GO:0044267	cellular protein metabolic process	ISS Inferred from Sequence or Structural Similarity	ECO:0000044 sequence similarity evidence
Biological Process	GO:0006412	translation	ISS Inferred from Sequence or Structural Similarity	ECO:0000250 sequence similarity evidence used in manual assertion	348496	Reviewed by curator
Cellular Component	GO:0005840	ribosome	ISM Inferred from Sequence Model Term mapped from: InterPro:PIRSF002144	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Biological Process	GO:0006412	translation	ISM Inferred from Sequence Model Term mapped from: InterPro:PIRSF002144	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Cellular Component	GO:0015935	small ribosomal subunit	ISM Inferred from Sequence Model Term mapped from: InterPro:TIGR01050	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0003735	structural constituent of ribosome	ISM Inferred from Sequence Model Term mapped from: InterPro:PIRSF002144	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Translation, post-translational modification, degradation Other PAO1 genes in this class

Pathways

Database	Xref	Pathway	Version	Evidence	PMID
KEGG	pae03010	Ribosome	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
PRINTS	PR00975	Ribosomal protein S19 family signature	IPR002222	Small ribosomal subunit protein uS19	65	80	2.2E-22
Gene3D	G3DSA:3.30.860.10	30s Ribosomal Protein S19; Chain A	IPR023575	Small ribosomal subunit protein uS19, superfamily	1	91	3.3E-39
NCBIfam	TIGR01050	JCVI: 30S ribosomal protein S19	IPR005732	Small ribosomal subunit protein uS19, bacterial-type	1	91	5.4E-44
PIRSF	PIRSF002144	RPS19p_RPS19a_RPS15e_RPS19o	IPR002222	Small ribosomal subunit protein uS19	1	91	1.6E-31
FunFam	G3DSA:3.30.860.10:FF:000001	30S ribosomal protein S19	-	-	1	91	1.1E-45
PRINTS	PR00975	Ribosomal protein S19 family signature	IPR002222	Small ribosomal subunit protein uS19	53	65	2.2E-22
SUPERFAMILY	SSF54570	Ribosomal protein S19	IPR023575	Small ribosomal subunit protein uS19, superfamily	3	84	1.11E-34
Hamap	MF_00531	30S ribosomal protein S19 [rpsS].	IPR002222	Small ribosomal subunit protein uS19	1	89	25.067484
Pfam	PF00203	Ribosomal protein S19	IPR002222	Small ribosomal subunit protein uS19	3	83	1.4E-35
PANTHER	PTHR11880	RIBOSOMAL PROTEIN S19P FAMILY MEMBER	IPR002222	Small ribosomal subunit protein uS19	3	85	3.1E-23
PRINTS	PR00975	Ribosomal protein S19 family signature	IPR002222	Small ribosomal subunit protein uS19	33	52	2.2E-22

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.