Pseudomonas aeruginosa PAO1, PA4272 (rplJ)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0044267 cellular protein metabolic process
ISS
Inferred from Sequence or Structural Similarity
ECO:0000044
sequence similarity evidence
Biological Process GO:0006412 translation
ISS
Inferred from Sequence or Structural Similarity
ECO:0000250
sequence similarity evidence used in manual assertion
782920 Reviewed by curator

Functional Classifications Manually Assigned by PseudoCAP

Translation, post-translational modification, degradation Other PAO1 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pae03010 Ribosome 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SUPERFAMILY SSF160369 Ribosomal protein L10-like IPR043141 Large ribosomal subunit protein uL10-like domain superfamily 4 160 2.35E-49
Gene3D G3DSA:6.10.250.2350 - - - 131 164 6.9E-16
FunFam G3DSA:3.30.70.1730:FF:000001 50S ribosomal protein L10 - - 1 130 4.5E-61
Pfam PF00466 Ribosomal protein L10 IPR001790 Large ribosomal subunit protein uL10 5 101 2.9E-26
Hamap MF_00362 50S ribosomal protein L10 [rplJ]. IPR022973 Large ribosomal subunit protein uL10, bacterial 3 161 27.953236
CDD cd05797 Ribosomal_L10 IPR047865 Large ribosomal subunit protein uL10, bacterial type 4 160 1.16029E-60
PANTHER PTHR11560 39S RIBOSOMAL PROTEIN L10, MITOCHONDRIAL IPR047865 Large ribosomal subunit protein uL10, bacterial type 6 156 4.8E-30
Gene3D G3DSA:3.30.70.1730 - IPR043141 Large ribosomal subunit protein uL10-like domain superfamily 1 130 9.7E-39

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.