Pseudomonas aeruginosa PAO1, PA5569 (rnpA)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0008033 tRNA processing
ISS
Inferred from Sequence or Structural Similarity 		ECO:0000250
sequence similarity evidence used in manual assertion		 2415431 Reviewed by curator
Biological Process GO:0001682 tRNA 5'-leader removal
ISS
Inferred from Sequence or Structural Similarity 		ECO:0000250
sequence similarity evidence used in manual assertion		 167017 Reviewed by curator
Molecular Function GO:0004526 ribonuclease P activity
ISS
Inferred from Sequence or Structural Similarity 		ECO:0000250
sequence similarity evidence used in manual assertion		 7509797 Reviewed by curator
Molecular Function GO:0004526 ribonuclease P activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_00227
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0000049 tRNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_00227
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0008033 tRNA processing
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_00227
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Translation, post-translational modification, degradation Other PAO1 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
FunFam G3DSA:3.30.230.10:FF:000105 Ribonuclease P protein component - - 1 118 3.5E-80
PANTHER PTHR33992 RIBONUCLEASE P PROTEIN COMPONENT IPR000100 Ribonuclease P 1 122 3.2E-32
NCBIfam TIGR00188 JCVI: ribonuclease P protein component, bacterial type IPR000100 Ribonuclease P 10 113 2.3E-26
Gene3D G3DSA:3.30.230.10 - IPR014721 Small ribosomal subunit protein uS5 domain 2-type fold, subgroup 1 118 6.0E-33
SUPERFAMILY SSF54211 Ribosomal protein S5 domain 2-like IPR020568 Ribosomal protein uS5 domain 2-type superfamily 6 115 3.54E-30
Pfam PF00825 Ribonuclease P IPR000100 Ribonuclease P 6 113 3.9E-30
Hamap MF_00227 Ribonuclease P protein component [rnpA]. IPR000100 Ribonuclease P 6 116 17.821733

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.