Pseudomonas aeruginosa UCBPP-PA14, PA14_03040

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0022857 transmembrane transporter activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00711
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0005887 integral component of plasma membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF07690
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0055085 transmembrane transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00711
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0016021 integral component of membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00711
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Transport of small molecules Other UCBPP-PA14 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SUPERFAMILY SSF103473 IPR036259 MFS transporter superfamily 8 485 2.75E-67
PRINTS PR01036 Tetracycline resistance protein TetB signature 203 221 1.4E-12
PRINTS PR01036 Tetracycline resistance protein TetB signature 107 127 1.4E-12
PRINTS PR01036 Tetracycline resistance protein TetB signature 137 161 1.4E-12
Pfam PF07690 Major Facilitator Superfamily IPR011701 Major facilitator superfamily 18 410 3.8E-55
PRINTS PR01036 Tetracycline resistance protein TetB signature 401 420 1.4E-12
ProSiteProfiles PS50850 Major facilitator superfamily (MFS) profile. IPR020846 Major facilitator superfamily domain 14 489 46.023
CDD cd17502 MFS_Azr1_MDR_like 18 421 1.43174E-110
Gene3D G3DSA:1.20.1720.10 14 227 7.9E-57
PRINTS PR01036 Tetracycline resistance protein TetB signature 17 41 1.4E-12
TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family IPR004638 Drug resistance transporter EmrB-like 15 419 2.1E-75

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.