Pseudomonas aeruginosa UCBPP-PA14, PA14_08680 (tufB)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0003924 GTPase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00009
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003746 translation elongation factor activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00485
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0005525 GTP binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00009
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006414 translational elongation
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00485
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Translation, post-translational modification, degradation Other UCBPP-PA14 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
FunFam G3DSA:3.40.50.300:FF:000003 Elongation factor Tu - - 1 206 3.0E-112
PRINTS PR00315 GTP-binding elongation factor signature IPR000795 Translational (tr)-type GTP-binding domain 78 88 1.9E-24
Hamap MF_00118_B Elongation factor Tu [tuf]. IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle 1 397 59.831211
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases IPR027417 P-loop containing nucleoside triphosphate hydrolase 6 222 4.15E-58
PRINTS PR00315 GTP-binding elongation factor signature IPR000795 Translational (tr)-type GTP-binding domain 14 27 1.9E-24
Pfam PF03144 Elongation factor Tu domain 2 IPR004161 Translation elongation factor EFTu-like, domain 2 228 296 1.2E-15
CDD cd03707 EFTU_III - - 303 392 7.78411E-65
Pfam PF00009 Elongation factor Tu GTP binding domain IPR000795 Translational (tr)-type GTP-binding domain 10 204 2.5E-55
PRINTS PR00315 GTP-binding elongation factor signature IPR000795 Translational (tr)-type GTP-binding domain 131 140 1.9E-24
SUPERFAMILY SSF50447 Translation proteins IPR009000 Translation protein, beta-barrel domain superfamily 208 304 1.56E-29
NCBIfam TIGR00231 JCVI: small GTP-binding protein domain IPR005225 Small GTP-binding protein domain 13 147 1.1E-13
NCBIfam TIGR00485 JCVI: elongation factor Tu IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle 1 397 0.0
Gene3D G3DSA:2.40.30.10 Translation factors - - 341 396 6.3E-28
PRINTS PR00315 GTP-binding elongation factor signature IPR000795 Translational (tr)-type GTP-binding domain 58 66 1.9E-24
Gene3D G3DSA:3.40.50.300 - IPR027417 P-loop containing nucleoside triphosphate hydrolase 1 206 2.2E-75
CDD cd03697 EFTU_II IPR033720 Elongation factor Tu, domain 2 214 300 1.90657E-52
PRINTS PR00315 GTP-binding elongation factor signature IPR000795 Translational (tr)-type GTP-binding domain 94 105 1.9E-24
CDD cd01884 EF_Tu IPR041709 Elongation factor Tu (EF-Tu), GTP-binding domain 11 206 0.0
Pfam PF03143 Elongation factor Tu C-terminal domain IPR004160 Translation elongation factor EFTu/EF1A, C-terminal 301 395 3.3E-39
SUPERFAMILY SSF50465 EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal 301 396 3.74E-36
Gene3D G3DSA:2.40.30.10 Translation factors - - 209 337 1.6E-56
PANTHER PTHR43721 ELONGATION FACTOR TU-RELATED - - 3 396 0.0
FunFam G3DSA:2.40.30.10:FF:000001 Elongation factor Tu - - 209 337 6.1E-68

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.