Pseudomonas aeruginosa UCBPP-PA14, PA14_08750 (rplL)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0006412 translation
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00855
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0005840 ribosome
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00855
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003735 structural constituent of ribosome
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00855
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Translation, post-translational modification, degradation Other UCBPP-PA14 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pau03010 Ribosome 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
CDD cd00387 Ribosomal_L7_L12 IPR000206 Large ribosomal subunit protein bL12 3 121 6.72548E-21
SUPERFAMILY SSF48300 Ribosomal protein L7/12, oligomerisation (N-terminal) domain IPR036235 Large ribosomal subunit protein bL12, oligomerization domain superfamily 4 58 2.22E-15
Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain IPR008932 Large ribosomal subunit protein bL12, oligomerization 4 50 2.5E-17
NCBIfam TIGR00855 JCVI: 50S ribosomal protein L7/L12 IPR000206 Large ribosomal subunit protein bL12 1 122 4.3E-45
FunFam G3DSA:3.30.1390.10:FF:000001 50S ribosomal protein L7/L12 - - 52 122 2.5E-30
SUPERFAMILY SSF54736 ClpS-like IPR014719 Ribosomal protein bL12, C-terminal/adaptor protein ClpS-like 51 122 2.62E-24
FunFam G3DSA:1.20.5.710:FF:000003 50S ribosomal protein L7/L12 - - 2 52 4.0E-24
Coils Coil Coil - - 102 122 -
Gene3D G3DSA:3.30.1390.10 - IPR014719 Ribosomal protein bL12, C-terminal/adaptor protein ClpS-like 52 122 6.5E-30
PANTHER PTHR45987 39S RIBOSOMAL PROTEIN L12 IPR000206 Large ribosomal subunit protein bL12 7 121 1.1E-26
Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain IPR013823 Large ribosomal subunit protein bL12, C-terminal 56 122 3.4E-29
Gene3D G3DSA:1.20.5.710 Single helix bin IPR036235 Large ribosomal subunit protein bL12, oligomerization domain superfamily 2 51 6.4E-20
Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. IPR000206 Large ribosomal subunit protein bL12 2 122 24.99555

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.