Pseudomonas aeruginosa UCBPP-PA14, PA14_08790 (rpsL)

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Molecular Function	GO:0003735	structural constituent of ribosome	ISM Inferred from Sequence Model Term mapped from: InterPro:cd03368	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Cellular Component	GO:0015935	small ribosomal subunit	ISM Inferred from Sequence Model Term mapped from: InterPro:cd03368	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Cellular Component	GO:0005840	ribosome	ISM Inferred from Sequence Model Term mapped from: InterPro:PTHR11652	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Biological Process	GO:0006412	translation	ISM Inferred from Sequence Model Term mapped from: InterPro:cd03368	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Translation, post-translational modification, degradation Other UCBPP-PA14 genes in this class

Pathways

Database	Xref	Pathway	Version	Evidence	PMID
KEGG	pau03010	Ribosome	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
Gene3D	G3DSA:2.40.50.140	-	IPR012340	Nucleic acid-binding, OB-fold	1	123	1.4E-63
Hamap	MF_00403_B	30S ribosomal protein S12 [rpsL].	IPR005679	Ribosomal protein uS12, bacterial-type	1	123	39.001648
PANTHER	PTHR11652	30S RIBOSOMAL PROTEIN S12 FAMILY MEMBER	IPR006032	Small ribosomal subunit protein uS12	18	123	7.9E-41
PRINTS	PR01034	Ribosomal protein S12 signature	IPR005679	Ribosomal protein uS12, bacterial-type	94	110	1.4E-60
PRINTS	PR01034	Ribosomal protein S12 signature	IPR005679	Ribosomal protein uS12, bacterial-type	110	122	1.4E-60
NCBIfam	TIGR00981	JCVI: 30S ribosomal protein S12	IPR005679	Ribosomal protein uS12, bacterial-type	1	123	2.2E-69
PRINTS	PR01034	Ribosomal protein S12 signature	IPR005679	Ribosomal protein uS12, bacterial-type	42	57	1.4E-60
PIRSF	PIRSF002133	RPS12p_RPS12a_RPS23e_RPS12o	IPR006032	Small ribosomal subunit protein uS12	1	123	8.0E-53
PRINTS	PR01034	Ribosomal protein S12 signature	IPR005679	Ribosomal protein uS12, bacterial-type	77	94	1.4E-60
MobiDBLite	mobidb-lite	consensus disorder prediction	-	-	100	123	-
SUPERFAMILY	SSF50249	Nucleic acid-binding proteins	IPR012340	Nucleic acid-binding, OB-fold	3	123	3.48E-51
CDD	cd03368	Ribosomal_S12	IPR005679	Ribosomal protein uS12, bacterial-type	3	110	7.43366E-66
PRINTS	PR01034	Ribosomal protein S12 signature	IPR005679	Ribosomal protein uS12, bacterial-type	58	77	1.4E-60
PRINTS	PR01034	Ribosomal protein S12 signature	IPR005679	Ribosomal protein uS12, bacterial-type	27	42	1.4E-60
Pfam	PF00164	Ribosomal protein S12/S23	IPR006032	Small ribosomal subunit protein uS12	12	123	3.8E-42
FunFam	G3DSA:2.40.50.140:FF:000001	30S ribosomal protein S12	-	-	1	123	3.4E-72

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.