Pseudomonas aeruginosa UCBPP-PA14, PA14_08960 (rplX)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Cellular Component GO:0005840 ribosome
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_01326_B
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003735 structural constituent of ribosome
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_01326_B
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003723 RNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd06089
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006412 translation
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_01326_B
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Translation, post-translational modification, degradation Other UCBPP-PA14 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pau03010 Ribosome 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
NCBIfam TIGR01079 JCVI: 50S ribosomal protein L24 IPR003256 Large ribosomal subunit protein uL24 1 100 1.4E-37
FunFam G3DSA:2.30.30.30:FF:000004 50S ribosomal protein L24 - - 1 101 3.0E-43
PANTHER PTHR12903 MITOCHONDRIAL RIBOSOMAL PROTEIN L24 IPR003256 Large ribosomal subunit protein uL24 3 100 7.4E-25
Gene3D G3DSA:2.30.30.30 - IPR014722 Large ribosomal subunit protein uL2, domain 2 1 102 5.9E-35
Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. IPR003256 Large ribosomal subunit protein uL24 2 96 21.400021
Pfam PF00467 KOW motif IPR005824 KOW 7 31 6.5E-6
SMART SM00739 kow_9 IPR005824 KOW 3 30 1.2E-4
SUPERFAMILY SSF50104 Translation proteins SH3-like domain IPR008991 Translation protein SH3-like domain superfamily 3 99 9.96E-34
Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 IPR003256 Large ribosomal subunit protein uL24 38 100 9.3E-26
CDD cd06089 KOW_RPL26 IPR041988 Large ribosomal subunit protein uL24, KOW domain 7 71 4.17166E-23

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.