Pseudomonas aeruginosa UCBPP-PA14, PA14_09040 (rplO)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Cellular Component GO:0015934 large ribosomal subunit
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR12934
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006412 translation
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR12934
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003735 structural constituent of ribosome
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR12934
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Translation, post-translational modification, degradation Other UCBPP-PA14 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pau03010 Ribosome 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SUPERFAMILY SSF52080 Ribosomal proteins L15p and L18e IPR036227 Large ribosomal subunit protein uL15/eL18 superfamily 4 142 2.62E-42
Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A IPR021131 Large ribosomal subunit protein uL15/eL18 28 143 8.4E-28
MobiDBLite mobidb-lite consensus disorder prediction - - 1 57 -
NCBIfam TIGR01071 JCVI: 50S ribosomal protein L15 IPR005749 Large ribosomal subunit protein uL15, bacterial-type 2 142 8.2E-43
PANTHER PTHR12934 50S RIBOSOMAL PROTEIN L15 IPR005749 Large ribosomal subunit protein uL15, bacterial-type 1 142 9.5E-35
Gene3D G3DSA:3.100.10.10 - - - 74 144 3.7E-12
Hamap MF_01341 50S ribosomal protein L15 [rplO]. IPR030878 Large ribosomal subunit protein uL15 3 143 17.556688
FunFam G3DSA:3.100.10.10:FF:000003 50S ribosomal protein L15 - - 75 144 1.8E-35

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.