Pseudomonas aeruginosa UCBPP-PA14, PA14_09090 (rpsK)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Cellular Component GO:0005840 ribosome
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF002131
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006412 translation
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF002131
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003735 structural constituent of ribosome
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF002131
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Translation, post-translational modification, degradation Other UCBPP-PA14 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pau03010 Ribosome 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PANTHER PTHR11759 40S RIBOSOMAL PROTEIN S14/30S RIBOSOMAL PROTEIN S11 IPR001971 Small ribosomal subunit protein uS11 12 127 1.4E-43
PIRSF PIRSF002131 RPS11p_RPS11a_RPS14e_RPS11o IPR001971 Small ribosomal subunit protein uS11 1 129 1.4E-53
Hamap MF_01310 30S ribosomal protein S11 [rpsK]. IPR001971 Small ribosomal subunit protein uS11 3 129 32.637253
Pfam PF00411 Ribosomal protein S11 IPR001971 Small ribosomal subunit protein uS11 19 128 2.4E-51
SUPERFAMILY SSF53137 Translational machinery components - - 15 129 2.09E-47
NCBIfam TIGR03632 JCVI: 30S ribosomal protein S11 IPR019981 Small ribosomal subunit protein uS11, bacterial-type 10 126 3.1E-55
Gene3D G3DSA:3.30.420.80 Ribosomal protein S11 IPR036967 Small ribosomal subunit protein uS11 superfamily 2 129 4.0E-51
FunFam G3DSA:3.30.420.80:FF:000001 30S ribosomal protein S11 - - 1 129 3.7E-69

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.