Pseudomonas aeruginosa UCBPP-PA14, PA14_10290 (acoR)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0008134 transcription factor binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00158
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016887 ATPase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00382
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0043565 sequence-specific DNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR01590
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006355 regulation of transcription, DNA-templated
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00158
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0005524 ATP binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00158
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0005515 protein binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF01590
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Transcriptional regulators Other UCBPP-PA14 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
CDD cd00009 AAA - - 323 488 2.92949E-25
Gene3D G3DSA:1.10.8.60 - - - 490 558 7.8E-14
SMART SM00382 AAA_5 IPR003593 AAA+ ATPase domain 337 481 1.4E-14
PRINTS PR01590 FIS bacterial regulatory protein HTH signature IPR002197 DNA binding HTH domain, Fis-type 581 598 3.3E-7
SUPERFAMILY SSF46689 Homeodomain-like IPR009057 Homeobox-like domain superfamily 528 617 4.78E-9
FunFam G3DSA:3.40.50.300:FF:000006 DNA-binding transcriptional regulator NtrC - - 317 488 1.1E-64
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases IPR027417 P-loop containing nucleoside triphosphate hydrolase 321 559 2.87E-59
Pfam PF02954 Bacterial regulatory protein, Fis family IPR002197 DNA binding HTH domain, Fis-type 579 614 5.4E-8
PANTHER PTHR32071 TRANSCRIPTIONAL REGULATORY PROTEIN - - 126 619 4.4E-108
Pfam PF00158 Sigma-54 interaction domain IPR002078 RNA polymerase sigma factor 54 interaction domain 322 480 9.4E-62
Gene3D G3DSA:3.40.50.300 - IPR027417 P-loop containing nucleoside triphosphate hydrolase 305 489 3.1E-57
PRINTS PR01590 FIS bacterial regulatory protein HTH signature IPR002197 DNA binding HTH domain, Fis-type 598 618 3.3E-7
Pfam PF01590 GAF domain IPR003018 GAF domain 77 203 4.5E-8
Gene3D G3DSA:1.10.10.60 - - - 559 620 6.3E-11
SUPERFAMILY SSF55781 GAF domain-like - - 69 212 6.21E-10
Gene3D G3DSA:3.30.450.40 - IPR029016 GAF-like domain superfamily 20 211 3.8E-50

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.