Pseudomonas aeruginosa UCBPP-PA14, PA14_10800 (ampR)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0006355 regulation of transcription, DNA-templated
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00126
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003700 DNA-binding transcription factor activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00126
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Transcriptional regulators Other UCBPP-PA14 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pau01501 beta-Lactam resistance 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF03466 LysR substrate binding domain IPR005119 LysR, substrate-binding 91 289 7.1E-35
PANTHER PTHR30537 HTH-TYPE TRANSCRIPTIONAL REGULATOR - - 6 289 1.3E-71
Gene3D G3DSA:3.40.190.10 - - - 98 285 8.4E-64
Gene3D G3DSA:3.40.190.10 - - - 164 259 8.4E-64
FunFam G3DSA:1.10.10.10:FF:000038 Glycine cleavage system transcriptional activator - - 6 89 1.6E-32
CDD cd08484 PBP2_LTTR_beta_lactamase IPR037420 HTH-type transcriptional activator AmpR, PBP2 95 285 6.83127E-119
SUPERFAMILY SSF46785 Winged helix DNA-binding domain IPR036390 Winged helix DNA-binding domain superfamily 2 86 3.87E-22
SUPERFAMILY SSF53850 Periplasmic binding protein-like II - - 85 290 1.07E-34
PRINTS PR00039 LysR bacterial regulatory protein HTH signature IPR000847 Transcription regulator HTH, LysR 44 55 1.9E-9
PRINTS PR00039 LysR bacterial regulatory protein HTH signature IPR000847 Transcription regulator HTH, LysR 34 44 1.9E-9
Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IPR000847 Transcription regulator HTH, LysR 8 67 3.7E-20
Gene3D G3DSA:1.10.10.10 - IPR036388 Winged helix-like DNA-binding domain superfamily 2 87 2.4E-22
PRINTS PR00039 LysR bacterial regulatory protein HTH signature IPR000847 Transcription regulator HTH, LysR 23 34 1.9E-9

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.