Pseudomonas aeruginosa UCBPP-PA14, PA14_11120

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0003677 DNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF46894
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0000160 phosphorelay signal transduction system
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00448
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006355 regulation of transcription, DNA-templated
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00421
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Transcriptional regulators Other UCBPP-PA14 genes in this class
Transport of small molecules Other UCBPP-PA14 genes in this class
Two-component regulatory systems Other UCBPP-PA14 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pau02020 Two-component system 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:1.10.10.10 - IPR036388 Winged helix-like DNA-binding domain superfamily 146 209 7.6E-16
Pfam PF00196 Bacterial regulatory proteins, luxR family IPR000792 Transcription regulator LuxR, C-terminal 152 206 4.1E-10
PANTHER PTHR43214 TWO-COMPONENT RESPONSE REGULATOR IPR039420 Transcriptional regulatory protein WalR-like 5 208 4.0E-32
SUPERFAMILY SSF52172 CheY-like IPR011006 CheY-like superfamily 5 141 4.27E-24
PRINTS PR00038 LuxR bacterial regulatory protein HTH signature IPR000792 Transcription regulator LuxR, C-terminal 166 182 1.0E-6
Gene3D G3DSA:3.40.50.2300 - - - 3 145 3.8E-26
CDD cd06170 LuxR_C_like IPR000792 Transcription regulator LuxR, C-terminal 152 208 3.00788E-14
SMART SM00448 REC_2 IPR001789 Signal transduction response regulator, receiver domain 6 122 7.5E-14
SMART SM00421 luxrmega5 IPR000792 Transcription regulator LuxR, C-terminal 149 206 6.6E-14
SUPERFAMILY SSF46894 C-terminal effector domain of the bipartite response regulators IPR016032 Signal transduction response regulator, C-terminal effector 140 208 5.44E-17
CDD cd17535 REC_NarL-like - - 8 127 8.69118E-29
PRINTS PR00038 LuxR bacterial regulatory protein HTH signature IPR000792 Transcription regulator LuxR, C-terminal 152 166 1.0E-6
PRINTS PR00038 LuxR bacterial regulatory protein HTH signature IPR000792 Transcription regulator LuxR, C-terminal 182 194 1.0E-6
Pfam PF00072 Response regulator receiver domain IPR001789 Signal transduction response regulator, receiver domain 8 122 2.2E-16

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.