Pseudomonas aeruginosa UCBPP-PA14, PA14_11410 (ribC)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments

Functional Classifications Manually Assigned by PseudoCAP

Biosynthesis of cofactors, prosthetic groups and carriers Other UCBPP-PA14 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pau00740 Riboflavin metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pau01110 Biosynthesis of secondary metabolites 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
PseudoCAP flavin biosynthesis ECO:0000037
not_recorded
KEGG pau01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:2.40.30.20 - IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily 1 91 5.1E-25
Pfam PF00677 Lumazine binding domain IPR026017 Lumazine-binding domain 100 184 5.4E-24
FunFam G3DSA:2.40.30.20:FF:000003 Riboflavin synthase, alpha subunit - - 1 89 1.3E-29
CDD cd00402 Riboflavin_synthase_like IPR001783 Lumazine-binding protein 1 186 7.06006E-102
FunFam G3DSA:2.40.30.20:FF:000004 Riboflavin synthase, alpha subunit - - 102 203 1.4E-36
PANTHER PTHR21098 RIBOFLAVIN SYNTHASE ALPHA CHAIN IPR001783 Lumazine-binding protein 1 209 3.3E-65
Gene3D G3DSA:2.40.30.20 - IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily 102 202 4.9E-31
SUPERFAMILY SSF63380 Riboflavin synthase domain-like IPR017938 Riboflavin synthase-like beta-barrel 93 194 7.4E-32
NCBIfam TIGR00187 JCVI: riboflavin synthase IPR001783 Lumazine-binding protein 1 198 9.0E-65
Pfam PF00677 Lumazine binding domain IPR026017 Lumazine-binding domain 3 87 2.4E-20
PIRSF PIRSF000498 Riboflavin_syn_A IPR001783 Lumazine-binding protein 1 212 1.3E-76
SUPERFAMILY SSF63380 Riboflavin synthase domain-like IPR017938 Riboflavin synthase-like beta-barrel 1 88 4.0E-25

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.