Pseudomonas aeruginosa UCBPP-PA14, PA14_11450 (nusB)

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Molecular Function	GO:0003723	RNA binding	ISM Inferred from Sequence Model Term mapped from: InterPro:PF01029	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Biological Process	GO:0006353	DNA-templated transcription, termination	ISM Inferred from Sequence Model Term mapped from: InterPro:PTHR11078	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Biological Process	GO:0006355	regulation of transcription, DNA-templated	ISM Inferred from Sequence Model Term mapped from: InterPro:PF01029	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Transcription, RNA processing and degradation Other UCBPP-PA14 genes in this class

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
Pfam	PF01029	NusB family	IPR006027	NusB/RsmB/TIM44	22	146	1.1E-32
CDD	cd00619	Terminator_NusB	-	-	21	147	2.86196E-40
PANTHER	PTHR11078	N UTILIZATION SUBSTANCE PROTEIN B-RELATED	IPR011605	NusB antitermination factor	61	148	1.2E-23
MobiDBLite	mobidb-lite	consensus disorder prediction	-	-	1	21	-
Gene3D	G3DSA:1.10.940.10	-	IPR035926	NusB-like superfamily	16	153	7.4E-44
NCBIfam	TIGR01951	JCVI: transcription antitermination factor NusB	IPR011605	NusB antitermination factor	21	147	1.4E-43
SUPERFAMILY	SSF48013	NusB-like	IPR035926	NusB-like superfamily	19	150	3.14E-43
FunFam	G3DSA:1.10.940.10:FF:000001	Transcription antitermination factor NusB	-	-	16	153	1.4E-61
Hamap	MF_00073	Transcription antitermination protein NusB [nusB].	IPR011605	NusB antitermination factor	19	150	22.444691

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.